- Predicted Gene MLOC_38606
MLOC_38606 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.331267 | 0.990167 | 1.11349 | 0.667848 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.53993 | 20.3372 | 20.8736 | 11.531 |
| INF1 | Young developing inflorescences (5mm) | 1.42829 | 1.73903 | 1.86617 | 1.09507 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.16777 | 1.29437 | 1.67383 | 1.16812 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.20819 | 0 | 0.480237 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.68493 | 1.86186 | 1.7005 | 5.66287 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.92652 | 2.526 | 2.89526 | 1.80992 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.50628 | 0.580997 | 0.171815 | 1.89347 |
CDS Structure of MLOC_38606
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38606.10
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g37940.1 |
+2 |
2e-41 |
148 |
79/110 (72%) |
13108.m04009 protein HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed |
| TAIR PP10 |
AT4G39970.1 |
+2 |
3e-33 |
125 |
61/77 (79%) |
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr4:18536678-18538429 REVERSE LENGTH=316 |