MLOC_38580 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0.178957000.174087
INF1Young developing inflorescences (5mm)0.2722800.3379650.350703
INF2Developing inflorescences (1-1.5 cm)0.2663740.08016090.1092970.200067
ROORoots from the seedlings (10 cm shoot stage)00.2418070.310090.596117
NODDeveloping tillers at six leaf stage, 3rd internode0.07952310.2080080.4727951.1095
CAR5Developing grain, bracts removed (5 DPA)0.1040010.1916020.4179120.388926
CAR15Developing grain, bracts removed (15 DPA)0.3270230.0906610.123510.572686



CDS Structure of MLOC_38580






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_38580.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_38580.2CUST_4961_PI427708100AvailableAvailablecontig_2550820 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----