- Predicted Gene MLOC_38571
MLOC_38571 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_38571_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_38571_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 5.36984 | 5.31366 | 5.35973 | 4.87916 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.26867 | 7.31671 | 6.44235 | 5.65702 |
INF1 | Young developing inflorescences (5mm) | 9.18237 | 10.7543 | 12.1033 | 7.80836 |
INF2 | Developing inflorescences (1-1.5 cm) | 13.7511 | 13.0159 | 11.8722 | 12.9723 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.2339 | 4.95986 | 4.05332 | 5.15569 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.81342 | 5.77826 | 8.46557 | 20.0746 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.18757 | 7.30488 | 8.57843 | 6.96723 |
CAR15 | Developing grain, bracts removed (15 DPA) | 8.27862 | 7.98034 | 6.60091 | 16.0497 |
CDS Structure of MLOC_38571
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38571.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g51520.2 |
-1 |
5e-77 |
273 |
139/189 (74%) |
13103.m05607 protein fip1 motif family protein, expressed |
TAIR PP10 |
AT5G58040.1 |
-1 |
1e-18 |
91 |
63/173 (36%) |
| Symbols: ATFIP1[V], FIPS5, ATFIPS5, FIP1[V] | homolog of yeast FIP1 [V] | chr5:23488865-23494000 FORWARD LENGTH=1196 |