- Predicted Gene MLOC_38557
MLOC_38557 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.95894 | 4.38927 | 4.54673 | 3.89097 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.80795 | 4.30748 | 3.81164 | 3.27803 |
| INF1 | Young developing inflorescences (5mm) | 7.50329 | 7.52889 | 8.47354 | 6.28469 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.95176 | 6.27716 | 6.94041 | 7.03115 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.1663 | 4.64203 | 6.30552 | 5.28382 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.76171 | 1.4089 | 2.31301 | 5.09058 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.20493 | 3.95679 | 4.57137 | 3.90026 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.12183 | 1.85804 | 2.35119 | 4.62186 |
CDS Structure of MLOC_38557
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38557.8
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g36250.1 |
+1 |
0.0 |
1185 |
594/787 (75%) |
13110.m03276 protein tetratricopeptide repeat, putative, expressed |
| TAIR PP10 |
AT1G33400.1 |
+1 |
0.0 |
555 |
314/796 (39%) |
| Symbols: TPR9 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:12104891-12109488 REVERSE LENGTH=798 |