- Predicted Gene MLOC_38555
MLOC_38555 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 86.9291 | 77.8729 | 78.769 | 78.8578 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 53.5907 | 48.0845 | 43.8943 | 40.5923 |
| INF1 | Young developing inflorescences (5mm) | 56.0222 | 57.6405 | 61.8795 | 47.7638 |
| INF2 | Developing inflorescences (1-1.5 cm) | 37.2017 | 45.3561 | 42.8047 | 46.0367 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 70.4307 | 83.7467 | 86.6746 | 96.6584 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 83.373 | 58.9858 | 50.2674 | 190.602 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 50.6713 | 53.6464 | 51.9587 | 51.0128 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 20.7153 | 18.4608 | 16.2255 | 43.9433 |
CDS Structure of MLOC_38555
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38555.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g32800.2 |
-1 |
0.0 |
613 |
300/383 (78%) |
13101.m03307 protein proteasome subunit, putative, expressed |
| TAIR PP10 |
AT4G19006.1 |
-1 |
0.0 |
588 |
283/385 (74%) |
Proteasome component (PCI) domain protein | chr4:10409349-10411347 REVERSE LENGTH=386 |