- Predicted Gene MLOC_38535
MLOC_38535 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 48.2133 | 50.0591 | 52.9522 | 47.9571 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 37.6391 | 34.3823 | 48.7766 | 33.667 |
| INF1 | Young developing inflorescences (5mm) | 35.0668 | 36.0686 | 34.7521 | 28.7633 |
| INF2 | Developing inflorescences (1-1.5 cm) | 33.9684 | 32.5132 | 34.7675 | 34.919 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 100.806 | 84.3734 | 77.6962 | 99.7356 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 87.9205 | 60.6896 | 31.6502 | 173.391 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 29.2677 | 26.9623 | 28.1259 | 25.7743 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.46049 | 6.06261 | 6.52956 | 12.9652 |
CDS Structure of MLOC_38535
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38535.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g44330.1 |
+3 |
0.0 |
1144 |
575/633 (91%) |
13108.m04807 protein peptidylprolyl isomerase domain and WD repeat-containing protein 1, putative, expressed |
| TAIR PP10 |
AT3G44600.1 |
+3 |
0.0 |
1009 |
481/592 (81%) |
| Symbols: CYP71 | cyclophilin71 | chr3:16165368-16169201 REVERSE LENGTH=631 |