MLOC_38530 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.157540.2010390.1479990.178381
LEAShoots from the seedlings (10 cm shoot stage)0.3505940.7400260.8807310.54214
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)1.875731.530921.346921.6276
NODDeveloping tillers at six leaf stage, 3rd internode00.02011850.07004640.141415
CAR5Developing grain, bracts removed (5 DPA)0.08895760.05641140.1105510.095744
CAR15Developing grain, bracts removed (15 DPA)0.05833010.06952170.05588660.168886



CDS Structure of MLOC_38530






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_38530.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376042NoneNoneNoneNone
MLOC_38530.1CUST_2482_PI427708080AvailableAvailablecontig_2550660 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g44240.1 -2 0.0 724 367/481 (76%) 13104.m04407 protein cytokinin-O-glucosyltransferase 3, putative, expressed
TAIR PP10 AT3G53150.1 -2 3e-100 316 196/490 (40%) | Symbols: UGT73D1 | UDP-glucosyl transferase 73D1 | chr3:19697736-19699259 REVERSE LENGTH=507