MLOC_38501 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains36.954424.452724.101525.3068
LEAShoots from the seedlings (10 cm shoot stage)16.660111.707316.54712.095
INF1Young developing inflorescences (5mm)17.854917.796219.784614.5239
INF2Developing inflorescences (1-1.5 cm)16.322116.795621.110617.7277
ROORoots from the seedlings (10 cm shoot stage)28.272832.78225.873533.0802
NODDeveloping tillers at six leaf stage, 3rd internode31.161134.508221.932695.0773
CAR5Developing grain, bracts removed (5 DPA)38.774239.741642.448335.6281
CAR15Developing grain, bracts removed (15 DPA)12.684711.152810.502124.9203



CDS Structure of MLOC_38501






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK252710.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252710.1CUST_19186_PI427708080NoneNoneNone
MLOC_26162.2NoneAvailableNonecontig_173946 (Mapped)
MLOC_38501.1NoneAvailableAvailablecontig_2550601 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----