MLOC_38500 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains743.548424.04547.4990
LEAShoots from the seedlings (10 cm shoot stage)378.431602.453786.320
INF1Young developing inflorescences (5mm)19.467434.265726.6390
INF2Developing inflorescences (1-1.5 cm)14.741311.039612.41810
ROORoots from the seedlings (10 cm shoot stage)2683.321081.721157.860
NODDeveloping tillers at six leaf stage, 3rd internode607.438783.1761078.480
CAR5Developing grain, bracts removed (5 DPA)58.90554.198752.44540
CAR15Developing grain, bracts removed (15 DPA)10.69198.807369.124720



CDS Structure of MLOC_38500






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251251.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251251.1CUST_18978_PI427708080NoneNoneNone
MLOC_14810.1NoneAvailableNonecontig_1569089 (Mapped)
MLOC_38500.2NoneAvailableNonecontig_2550600 (Mapped)
MLOC_45747.1NoneAvailableAvailablecontig_280723 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----