- Predicted Gene MLOC_38476
MLOC_38476 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 278.674 | 215.213 | 265.219 | 244.874 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1222.3 | 849.01 | 934.345 | 819.834 |
| INF1 | Young developing inflorescences (5mm) | 1.1672 | 1.03415 | 1.47152 | 1.10633 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.69807 | 3.22585 | 8.24018 | 5.62245 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 29.5316 | 71.9188 | 25.6821 | 71.988 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 215.059 | 498.394 | 40.2095 | 1081.43 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1326.57 | 1775.01 | 1412.24 | 1562.78 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 174.465 | 118.781 | 188.359 | 402.165 |
CDS Structure of MLOC_38476
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38476.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g02340.1 |
+2 |
4e-41 |
141 |
65/95 (68%) |
13112.m00164 protein LTPL14 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
| TAIR PP10 |
AT5G59320.1 |
+2 |
5e-31 |
114 |
49/93 (53%) |
| Symbols: LTP3 | lipid transfer protein 3 | chr5:23929051-23929492 FORWARD LENGTH=115 |