MLOC_38451 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains31.738733.860131.359934.4715
LEAShoots from the seedlings (10 cm shoot stage)22.519511.912812.364314.2891
INF1Young developing inflorescences (5mm)71.880674.950877.969565.2623
INF2Developing inflorescences (1-1.5 cm)75.721876.987369.807484.9989
ROORoots from the seedlings (10 cm shoot stage)30.914534.37434.139644.2339
NODDeveloping tillers at six leaf stage, 3rd internode11.850612.143711.671742.9368
CAR5Developing grain, bracts removed (5 DPA)48.897247.866447.549249.0501
CAR15Developing grain, bracts removed (15 DPA)32.93330.630124.991670.8914



CDS Structure of MLOC_38451






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_38451.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366734NoneNoneNoneNone
MLOC_38451.1CUST_2476_PI427708080AvailableAvailablecontig_2550487 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g42220.1 +1 0.0 967 494/525 (94%) 13103.m04543 protein T-complex protein, putative, expressed
TAIR PP10 AT5G20890.1 +1 0.0 908 457/525 (87%) TCP-1/cpn60 chaperonin family protein | chr5:7087020-7089906 REVERSE LENGTH=527