- Predicted Gene MLOC_38450
MLOC_38450 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.97317 | 4.54784 | 3.78826 | 4.30206 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.2129 | 0.584687 | 1.25093 | 0.832252 |
| INF1 | Young developing inflorescences (5mm) | 0.0889946 | 0 | 0.0559488 | 0.0606164 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.260346 | 0.328179 | 0.163148 | 0.28857 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.537318 | 1.02726 | 2.14259 | 1.19284 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.16649 | 4.45206 | 0.0554686 | 10.1755 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.06198 | 3.04037 | 1.34398 | 2.13116 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.0491722 | 0.193399 | 0.241612 |
CDS Structure of MLOC_38450
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38450.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g37400.1 |
-1 |
2e-53 |
176 |
97/138 (70%) |
13109.m03710 protein OsSAUR45 - Auxin-responsive SAUR gene family member |
| TAIR PP10 |
AT1G29430.1 |
-1 |
2e-16 |
76 |
43/104 (41%) |
SAUR-like auxin-responsive protein family | chr1:10302801-10303226 REVERSE LENGTH=141 |