MLOC_38443 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.3501921.602819.04380
LEAShoots from the seedlings (10 cm shoot stage)26.414119.707712.59040
INF1Young developing inflorescences (5mm)30.432726.111629.49230
INF2Developing inflorescences (1-1.5 cm)36.027635.314929.17280
ROORoots from the seedlings (10 cm shoot stage)15.883816.937820.75160
NODDeveloping tillers at six leaf stage, 3rd internode19.722412.045311.11980
CAR5Developing grain, bracts removed (5 DPA)27.047218.564122.48820
CAR15Developing grain, bracts removed (15 DPA)24.373118.374118.53140



CDS Structure of MLOC_38443






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK356235
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356235CUST_19637_PI427708080NoneNoneNone
MLOC_20088.1NoneAvailableNonecontig_158797 (Mapped)
MLOC_36523.1NoneAvailableAvailablecontig_2546915 (Mapped)
MLOC_38443.1NoneAvailableNonecontig_2550467 (Mapped)
MLOC_527.1NoneAvailableNonecontig_1037877 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----