MLOC_3844 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.664614.670264.992284.34842
LEAShoots from the seedlings (10 cm shoot stage)0.37856700.2860460.318114
INF1Young developing inflorescences (5mm)2.300211.83562.147411.60256
INF2Developing inflorescences (1-1.5 cm)16.59234.170118.945669.7641
ROORoots from the seedlings (10 cm shoot stage)1.094781.946862.134122.11989
NODDeveloping tillers at six leaf stage, 3rd internode6.484742.736898.1044212.2304
CAR5Developing grain, bracts removed (5 DPA)10.44818.968889.86228.72762
CAR15Developing grain, bracts removed (15 DPA)2.346871.106431.400273.61514



CDS Structure of MLOC_3844






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_3844.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_3844.1CUST_5366_PI427708083AvailableAvailablecontig_133907 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g69850.1 -1 4e-30 116 62/97 (64%) 13101.m07576 protein OsMADS65 - MADS-box family gene with MIKC* type-box, expressed
TAIR PP10None-----