- Predicted Gene MLOC_38413
MLOC_38413 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.773194 | 0.899946 | 1.21746 | 0.933047 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 13.2334 | 21.6683 | 23.5832 | 16.0796 |
| INF1 | Young developing inflorescences (5mm) | 1.19916 | 0.869037 | 1.05631 | 0.908978 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.398082 | 0.5794 | 0.666545 | 0.602798 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.123574 | 0.0683935 | 0.220228 | 0.09464 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.29708 | 6.44324 | 14.005 | 23.4395 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.41833 | 2.72917 | 2.43507 | 2.52845 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.395259 | 0.462175 | 0.270454 | 0.960529 |
CDS Structure of MLOC_38413
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38413.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g59090.1 |
+2 |
5e-116 |
360 |
208/276 (75%) |
13101.m06276 protein thylakoid lumenal 20 kDa protein, putative, expressed |
| TAIR PP10 |
AT3G56650.1 |
+2 |
2e-103 |
326 |
152/195 (78%) |
Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein | chr3:20984807-20985913 FORWARD LENGTH=262 |