MLOC_38386 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.58510.131810.61648.04786
LEAShoots from the seedlings (10 cm shoot stage)23.072729.925335.226517.1055
INF1Young developing inflorescences (5mm)8.090087.5726.86844.49322
INF2Developing inflorescences (1-1.5 cm)4.472056.383133.306633.96562
ROORoots from the seedlings (10 cm shoot stage)21.085812.442813.222811.8231
NODDeveloping tillers at six leaf stage, 3rd internode15.870419.397419.950943.9056
CAR5Developing grain, bracts removed (5 DPA)4.109433.417853.751442.51213
CAR15Developing grain, bracts removed (15 DPA)2.627862.496171.296413.80711



CDS Structure of MLOC_38386






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_38386.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_38386.3CUST_12263_PI427708083AvailableAvailablecontig_2550360 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g55360.3 -1 5e-65 210 107/145 (74%) 13101.m05831 protein phosphatidate cytidylyltransferase, putative, expressed
TAIR PP10 AT4G22340.2 -1 2e-52 175 88/140 (63%) | Symbols: CDS2 | cytidinediphosphate diacylglycerol synthase 2 | chr4:11800150-11802172 REVERSE LENGTH=365