MLOC_38381 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.427744.761024.337584.51438
LEAShoots from the seedlings (10 cm shoot stage)2.022010.1602250.5614020.878135
INF1Young developing inflorescences (5mm)13.875713.1818.9379911.1184
INF2Developing inflorescences (1-1.5 cm)7.3586311.04247.6775210.8191
ROORoots from the seedlings (10 cm shoot stage)0.7433062.251431.586732.86914
NODDeveloping tillers at six leaf stage, 3rd internode0.01045480.04059950.02685160.151695
CAR5Developing grain, bracts removed (5 DPA)3.993843.983594.885454.54712
CAR15Developing grain, bracts removed (15 DPA)0.2722720.1484420.5342620.674139



CDS Structure of MLOC_38381






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_38381.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_38381.1CUST_11639_PI427708080AvailableAvailablecontig_2550351 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g33040.1 +2 0.0 1558 803/956 (84%) 13101.m03335 protein kinesin motor domain containing protein, expressed
TAIR PP10 AT1G18370.1 +2 0.0 1090 602/977 (62%) | Symbols: HIK, ATNACK1, NACK1 | ATP binding microtubule motor family protein | chr1:6319732-6323820 REVERSE LENGTH=974