- Predicted Gene MLOC_38338
MLOC_38338 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.556985 | 0.286407 | 0.38247 | 0.322117 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.537261 | 0.217741 | 0.526212 | 0.299687 |
| INF1 | Young developing inflorescences (5mm) | 1.04041 | 0.721616 | 1.33646 | 0.755655 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.30971 | 1.70205 | 0.682574 | 1.24006 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.23571 | 0.418536 | 0.758215 | 0.53484 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.273526 | 0.489207 | 0.4936 | 1.08344 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.722355 | 1.26563 | 0.989579 | 0.800036 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.125913 | 0.0502841 | 0.12019 | 0.218031 |
CDS Structure of MLOC_38338
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38338.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g45060.1 |
+2 |
5e-45 |
158 |
107/133 (80%) |
13105.m04781 protein RING-H2 finger protein ATL2M, putative, expressed |
| TAIR PP10 |
AT2G46160.1 |
+2 |
2e-28 |
112 |
75/134 (56%) |
RING/U-box superfamily protein | chr2:18963109-18963753 FORWARD LENGTH=214 |