MLOC_38288 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.83073.265243.353063.30709
LEAShoots from the seedlings (10 cm shoot stage)2.619562.17221.762141.81557
INF1Young developing inflorescences (5mm)6.066555.118484.39584.19851
INF2Developing inflorescences (1-1.5 cm)4.423594.470415.133274.64951
ROORoots from the seedlings (10 cm shoot stage)2.224453.833242.492693.80285
NODDeveloping tillers at six leaf stage, 3rd internode2.786863.734435.1162312.4109
CAR5Developing grain, bracts removed (5 DPA)4.398753.420753.501233.33289
CAR15Developing grain, bracts removed (15 DPA)1.91142.124813.281824.61793



CDS Structure of MLOC_38288






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK365455
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365455CUST_21100_PI427708080NoneNoneNone
MLOC_22499.1NoneAvailableNonecontig_1607697 (Mapped)
MLOC_2880.1NoneAvailableNonecontig_1256906 (Not mapped)
MLOC_33449.3NoneAvailableNonecontig_237464 (Mapped)
MLOC_33747.1NoneAvailableNonecontig_2399409 (Not mapped)
MLOC_35767.2NoneAvailableNonecontig_252128 (Not mapped)
MLOC_36016.1NoneAvailableNonecontig_2530629 (Not mapped)
MLOC_38288.1NoneAvailableAvailablecontig_2550115 (Mapped)
MLOC_40505.2NoneAvailableNonecontig_2560483 (Mapped)
MLOC_41972.1NoneAvailableNonecontig_2616564 (Not mapped)
MLOC_43895.1NoneAvailableNonecontig_273304 (Mapped)
MLOC_50023.1NoneAvailableNonecontig_352781 (Not mapped)
MLOC_6144.1NoneAvailableNonecontig_1371210 (Not mapped)
MLOC_81206.1NoneAvailableNonecontig_950532 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----