MLOC_38256 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.01013.067553.584092.8466
LEAShoots from the seedlings (10 cm shoot stage)3.715532.821793.161512.40347
INF1Young developing inflorescences (5mm)5.713165.925596.598384.70536
INF2Developing inflorescences (1-1.5 cm)10.15159.2570310.05339.53191
ROORoots from the seedlings (10 cm shoot stage)3.97663.208833.991323.30854
NODDeveloping tillers at six leaf stage, 3rd internode2.720573.369864.824049.55547
CAR5Developing grain, bracts removed (5 DPA)5.386685.741845.497214.67667
CAR15Developing grain, bracts removed (15 DPA)3.401343.018373.436736.99476



CDS Structure of MLOC_38256






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_38256.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_38256.1CUST_11630_PI427708080AvailableAvailablecontig_2550039 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g18510.1 -3 4e-99 318 204/458 (45%) 13107.m01940 protein OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed
TAIR PP10None-----