MLOC_38251 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.5973710.556610.832610.2484
LEAShoots from the seedlings (10 cm shoot stage)9.756587.042437.464587.3484
INF1Young developing inflorescences (5mm)13.856713.492213.455111.7057
INF2Developing inflorescences (1-1.5 cm)16.331215.08514.850316.899
ROORoots from the seedlings (10 cm shoot stage)6.4606310.39867.061312.5412
NODDeveloping tillers at six leaf stage, 3rd internode5.440498.509298.8867631.923
CAR5Developing grain, bracts removed (5 DPA)11.886612.016411.677311.6642
CAR15Developing grain, bracts removed (15 DPA)5.441725.023826.1121612.3116



CDS Structure of MLOC_38251






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK369050
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369050CUST_21728_PI427708080NoneNoneNone
MLOC_11559.1NoneAvailableNonecontig_1561347 (Mapped)
MLOC_38251.1NoneAvailableAvailablecontig_2550034 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----