MLOC_38238 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.304922.56825.37550
LEAShoots from the seedlings (10 cm shoot stage)29.015425.760922.95670
INF1Young developing inflorescences (5mm)24.547425.558526.04960
INF2Developing inflorescences (1-1.5 cm)29.569531.771925.1250
ROORoots from the seedlings (10 cm shoot stage)9.5739117.198412.57530
NODDeveloping tillers at six leaf stage, 3rd internode19.743325.337126.24020
CAR5Developing grain, bracts removed (5 DPA)27.735325.800927.35960
CAR15Developing grain, bracts removed (15 DPA)11.88710.913912.38070



CDS Structure of MLOC_38238






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364088
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364088CUST_20829_PI427708080NoneNoneNone
MLOC_16534.3NoneAvailableAvailablecontig_1573630 (Mapped)
MLOC_37909.3NoneAvailableNonecontig_2549334 (Mapped)
MLOC_38238.3NoneAvailableNonecontig_2550009 (Mapped)
MLOC_39937.1NoneAvailableNonecontig_2555544 (Not mapped)
MLOC_6573.1NoneAvailableNonecontig_137745 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----