MLOC_3822 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 801.014 | 526.661 | 542.408 | 564.302 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 15.7092 | 2.80649 | 1.54872 | 5.45537 |
| INF1 | Young developing inflorescences (5mm) | 26.6922 | 18.4453 | 24.68 | 19.9104 |
| INF2 | Developing inflorescences (1-1.5 cm) | 47.2489 | 28.2218 | 74.5113 | 48.0984 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 13.1911 | 43.7249 | 17.0301 | 37.3987 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.354143 | 0.0837885 | 0.130732 | 0.231663 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 253.744 | 256.641 | 208.563 | 221.757 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 41.3625 | 18.6602 | 34.1751 | 76.3458 |
CDS Structure of MLOC_3822
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3822.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g02290.1 |
-2 |
9e-39 |
136 |
72/93 (77%) |
13112.m00157 protein LTPL23 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
| TAIR PP10 |
AT5G59320.1 |
-2 |
4e-17 |
77 |
40/94 (43%) |
| Symbols: LTP3 | lipid transfer protein 3 | chr5:23929051-23929492 FORWARD LENGTH=115 |
