- Predicted Gene MLOC_38189
MLOC_38189 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 47.5086 | 57.6997 | 61.2705 | 65.3544 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 92.4848 | 23.7035 | 29.6028 | 45.6201 |
| INF1 | Young developing inflorescences (5mm) | 39.4646 | 41.6825 | 40.7376 | 37.7618 |
| INF2 | Developing inflorescences (1-1.5 cm) | 52.7801 | 54.7434 | 48.9652 | 63.5519 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 32.4159 | 47.6973 | 29.6119 | 63.4066 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 449.402 | 549.731 | 416.61 | 1934.95 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 57.5143 | 54.2874 | 59.2745 | 62.0648 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 15.1965 | 12.5726 | 13.9014 | 34.8917 |
CDS Structure of MLOC_38189
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38189.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g64320.1 |
+2 |
0.0 |
793 |
494/729 (68%) |
13103.m07146 protein expressed protein |
| TAIR PP10 |
AT5G43310.2 |
+2 |
7e-55 |
205 |
227/749 (30%) |
COP1-interacting protein-related | chr5:17379735-17385387 REVERSE LENGTH=1180 |