MLOC_38186 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains72.261457.176161.06350
LEAShoots from the seedlings (10 cm shoot stage)40.691645.425746.74550
INF1Young developing inflorescences (5mm)38.316445.681548.04090
INF2Developing inflorescences (1-1.5 cm)32.826538.826836.23510
ROORoots from the seedlings (10 cm shoot stage)29.257647.734832.55190
NODDeveloping tillers at six leaf stage, 3rd internode60.522581.929261.17370
CAR5Developing grain, bracts removed (5 DPA)48.051247.132945.67620
CAR15Developing grain, bracts removed (15 DPA)12.456612.284312.54050



CDS Structure of MLOC_38186






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK354651
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354651CUST_19405_PI427708080NoneNoneNone
MLOC_16684.1NoneAvailableAvailablecontig_1574203 (Mapped)
MLOC_2463.1NoneAvailableNonecontig_12182 (Mapped)
MLOC_38186.1NoneAvailableNonecontig_2549881 (Mapped)
MLOC_77138.2NoneAvailableNonecontig_74503 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----