MLOC_38162 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7912721.124081.293351.24568
LEAShoots from the seedlings (10 cm shoot stage)1.614410.1957910.586230.666444
INF1Young developing inflorescences (5mm)0.03466860.06896040.01479280.0423444
INF2Developing inflorescences (1-1.5 cm)0.012528600.01502070.0276979
ROORoots from the seedlings (10 cm shoot stage)0.4335130.3287840.5196070.466405
NODDeveloping tillers at six leaf stage, 3rd internode00.01436700.11103
CAR5Developing grain, bracts removed (5 DPA)0.3360430.3769440.2316050.371145
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_38162






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_38162.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_38162.1CUST_11613_PI427708080AvailableAvailablecontig_2549832 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g06840.1 +1 0.0 658 337/407 (83%) 13112.m00706 protein ATEXO70C2, putative, expressed
TAIR PP10 AT5G13990.1 +1 1e-132 416 214/410 (52%) | Symbols: ATEXO70C2, EXO70C2 | exocyst subunit exo70 family protein C2 | chr5:4514680-4516767 REVERSE LENGTH=695