MLOC_38148 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4472290.3196860.5619110.425451
LEAShoots from the seedlings (10 cm shoot stage)0.03676780.044771100.0330752
INF1Young developing inflorescences (5mm)000.02223720.0227645
INF2Developing inflorescences (1-1.5 cm)0.1557560.2055440.2038370.240989
ROORoots from the seedlings (10 cm shoot stage)0.4291750.6035520.6166070.67732
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.6482540.8046590.3551040.675949
CAR15Developing grain, bracts removed (15 DPA)0.1860840.1297490.1331220.41384



CDS Structure of MLOC_38148






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_38148.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360622NoneNoneNoneNone
MLOC_38148.3CUST_2448_PI427708080AvailableAvailablecontig_2549803 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g12450.1 -2 7e-171 500 298/497 (60%) 13105.m01353 protein hydroquinone glucosyltransferase, putative, expressed
TAIR PP10 AT4G01070.1 -2 2e-78 259 195/477 (41%) | Symbols: GT72B1, UGT72B1 | UDP-Glycosyltransferase superfamily protein | chr4:461858-463300 REVERSE LENGTH=480