- Predicted Gene MLOC_38135
MLOC_38135 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_38135_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_38135_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 109.356 | 55.8401 | 73.8404 | 60.6733 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 33.434 | 6.19413 | 9.11574 | 12.8399 |
INF1 | Young developing inflorescences (5mm) | 167.582 | 174.893 | 189.559 | 113.862 |
INF2 | Developing inflorescences (1-1.5 cm) | 104.273 | 140.232 | 138.018 | 109.981 |
ROO | Roots from the seedlings (10 cm shoot stage) | 76.7222 | 48.0249 | 62.6143 | 51.3635 |
NOD | Developing tillers at six leaf stage, 3rd internode | 11.817 | 14.9361 | 21.0216 | 40.7447 |
CAR5 | Developing grain, bracts removed (5 DPA) | 35.5617 | 35.3794 | 41.1529 | 27.9694 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.5331 | 2.77486 | 4.60758 | 7.24757 |
CDS Structure of MLOC_38135
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38135.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g38560.1 |
-2 |
2e-17 |
78 |
39/39 (100%) |
13105.m04047 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative |
TAIR PP10 |
AT3G09480.1 |
-2 |
2e-17 |
77 |
38/39 (97%) |
Histone superfamily protein | chr3:2914890-2915270 REVERSE LENGTH=126 |