- Predicted Gene MLOC_38120
MLOC_38120 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.62312 | 3.57218 | 3.94187 | 3.08846 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.91982 | 0.425771 | 0.338329 | 0.76389 |
| INF1 | Young developing inflorescences (5mm) | 15.2894 | 16.5187 | 14.5156 | 10.4774 |
| INF2 | Developing inflorescences (1-1.5 cm) | 10.6222 | 12.1186 | 9.67727 | 9.95745 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.629601 | 2.79506 | 2.36049 | 2.28879 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0809293 | 0.0435272 | 0.0324709 | 0.123349 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.86888 | 2.66676 | 2.64133 | 2.12379 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.992857 | 0.66502 | 0.823307 | 1.55652 |
CDS Structure of MLOC_38120
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38120.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g58630.2 |
-2 |
2e-77 |
269 |
133/178 (75%) |
13104.m06162 protein DNA mismatch repair protein MSH3, putative, expressed |
| TAIR PP10 |
AT4G25540.1 |
-2 |
2e-158 |
492 |
256/463 (55%) |
| Symbols: MSH3, ATMSH3 | homolog of DNA mismatch repair protein MSH3 | chr4:13042700-13048115 REVERSE LENGTH=1081 |