- Predicted Gene MLOC_38100
MLOC_38100 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_38100_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_38100_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 5.85603 | 30.8452 | 24.6112 | 18.2711 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 33.2776 | 24.1276 | 23.3439 | 20.6123 |
INF1 | Young developing inflorescences (5mm) | 55.1192 | 58.1026 | 60.4362 | 39.9334 |
INF2 | Developing inflorescences (1-1.5 cm) | 64.4546 | 67.9608 | 60.0512 | 61.6506 |
ROO | Roots from the seedlings (10 cm shoot stage) | 14.2701 | 23.8718 | 17.0922 | 21.7009 |
NOD | Developing tillers at six leaf stage, 3rd internode | 15.8956 | 25.4257 | 22.0148 | 71.1805 |
CAR5 | Developing grain, bracts removed (5 DPA) | 32.5041 | 27.5727 | 32.7965 | 25.4004 |
CAR15 | Developing grain, bracts removed (15 DPA) | 31.4131 | 29.6275 | 32.0074 | 56.9156 |
CDS Structure of MLOC_38100
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38100.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g40780.1 |
+2 |
0.0 |
1743 |
950/1414 (67%) |
13110.m03782 protein CCR4-Not complex component, Not1domain containing protein, expressed |
TAIR PP10 |
AT1G02080.2 |
+2 |
0.0 |
1182 |
674/1414 (48%) |
transcription regulators | chr1:373694-386682 FORWARD LENGTH=2377 |