- Predicted Gene MLOC_38053
MLOC_38053 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_38053_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 9.99071 | 28.9118 | 23.1553 | 20.4728 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 22.432 | 17.9512 | 13.2378 | 14.9918 |
INF1 | Young developing inflorescences (5mm) | 30.5833 | 30.9673 | 31.1599 | 23.2152 |
INF2 | Developing inflorescences (1-1.5 cm) | 32.3598 | 33.864 | 29.2768 | 31.7901 |
ROO | Roots from the seedlings (10 cm shoot stage) | 11.0506 | 21.4312 | 14.7068 | 21.5701 |
NOD | Developing tillers at six leaf stage, 3rd internode | 8.78502 | 10.6224 | 9.13664 | 33.4306 |
CAR5 | Developing grain, bracts removed (5 DPA) | 22.3366 | 18.899 | 20.0924 | 17.5386 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.02985 | 7.95807 | 10.6984 | 17.5121 |
CDS Structure of MLOC_38053
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38053.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g04030.1 |
+2 |
0.0 |
556 |
280/303 (92%) |
13112.m00377 protein HEAT repeat family protein, putative, expressed |
TAIR PP10 |
AT2G26780.1 |
+2 |
4e-158 |
489 |
236/303 (78%) |
ARM repeat superfamily protein | chr2:11410125-11423598 FORWARD LENGTH=1826 |