- Predicted Gene MLOC_38048
MLOC_38048 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_38048_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_38048_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 46.074 | 29.7417 | 33.8136 | 37.4755 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 18.5222 | 20.1207 | 26.3699 | 19.7611 |
INF1 | Young developing inflorescences (5mm) | 30.5848 | 31.5643 | 25.5418 | 26.2428 |
INF2 | Developing inflorescences (1-1.5 cm) | 26.401 | 17.9463 | 19.4717 | 23.9402 |
ROO | Roots from the seedlings (10 cm shoot stage) | 36.6508 | 30.8425 | 32.723 | 42.2317 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.29784 | 2.80963 | 7.49299 | 12.1466 |
CAR5 | Developing grain, bracts removed (5 DPA) | 22.6248 | 26.1653 | 29.1236 | 27.0426 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.15043 | 9.4423 | 6.15542 | 20.5891 |
CDS Structure of MLOC_38048
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38048.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g53280.2 |
-2 |
1e-78 |
238 |
116/122 (95%) |
13101.m05581 protein 50S ribosomal protein L20, putative, expressed |
TAIR PP10 |
AT1G16740.1 |
-2 |
2e-67 |
209 |
103/124 (83%) |
Ribosomal protein L20 | chr1:5727773-5728950 FORWARD LENGTH=126 |