- Predicted Gene MLOC_38027
MLOC_38027 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 44.6925 | 47.7744 | 48.7416 | 43.0735 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 14.4986 | 7.10144 | 6.98928 | 7.77851 |
| INF1 | Young developing inflorescences (5mm) | 5.19642 | 5.05948 | 5.8949 | 3.99753 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.46387 | 6.21426 | 5.37523 | 5.70255 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 21.615 | 27.758 | 19.8358 | 27.6693 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 18.1471 | 12.8084 | 8.95575 | 35.4241 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.72418 | 5.54157 | 6.64812 | 5.10604 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 9.20515 | 6.967 | 7.66786 | 16.5595 |
CDS Structure of MLOC_38027
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38027.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g33860.1 |
-1 |
0.0 |
577 |
298/361 (83%) |
13109.m03383 protein protein kinase, putative, expressed |
| TAIR PP10 |
AT3G59350.2 |
-1 |
0.0 |
525 |
275/353 (78%) |
Protein kinase superfamily protein | chr3:21933392-21934883 FORWARD LENGTH=366 |
