MLOC_3802 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 108.717 | 82.2061 | 83.7103 | 97.3477 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 29.3479 | 14.2885 | 23.5584 | 18.655 |
| INF1 | Young developing inflorescences (5mm) | 44.0732 | 48.8258 | 73.9032 | 55.7791 |
| INF2 | Developing inflorescences (1-1.5 cm) | 35.2073 | 37.2986 | 37.6805 | 47.644 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 125.438 | 118.416 | 147.794 | 156.055 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 17.2377 | 15.1282 | 3.49588 | 33.1256 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 287.861 | 324.212 | 272.607 | 349.888 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 197.525 | 186.404 | 146.908 | 500.66 |
CDS Structure of MLOC_3802
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3802.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g37970.3 |
+1 |
3e-80 |
248 |
138/155 (89%) |
13105.m03962 protein universal stress protein domain containing protein, putative, expressed |
| TAIR PP10 |
AT3G53990.1 |
+1 |
5e-54 |
179 |
94/154 (61%) |
Adenine nucleotide alpha hydrolases-like superfamily protein | chr3:19989658-19991019 REVERSE LENGTH=160 |
