- Predicted Gene MLOC_38014
MLOC_38014 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 34.3532 | 30.23 | 40.211 | 26.1029 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 40.5688 | 71.2384 | 69.4661 | 39.328 |
| INF1 | Young developing inflorescences (5mm) | 0.495134 | 0.161646 | 0.200204 | 0.215815 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.127532 | 0.174922 | 0.428108 | 0.192745 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 458.528 | 150.615 | 166.274 | 207.678 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 27.7899 | 50.8138 | 77.1904 | 149.434 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.950694 | 0.926505 | 0.972241 | 0.720728 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.252706 | 0.0860516 | 0.123195 | 0.362239 |
CDS Structure of MLOC_38014
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38014.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g15870.1 |
+3 |
4e-14 |
52 |
22/55 (40%) |
13108.m01696 protein retrotransposon protein, putative, Ty1-copia subclass |
| TAIR PP10 |
AT3G61430.2 |
+1 |
7e-12 |
65 |
28/30 (93%) |
| Symbols: PIP1A, ATPIP1, PIP1, PIP1;1 | plasma membrane intrinsic protein 1A | chr3:22733657-22735113 FORWARD LENGTH=286 |