MLOC_38008 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains17.967211.308213.035110.5164
LEAShoots from the seedlings (10 cm shoot stage)9.394810.30816.18667.70659
INF1Young developing inflorescences (5mm)10.764712.848914.18057.21323
INF2Developing inflorescences (1-1.5 cm)7.665568.177017.81916.44874
ROORoots from the seedlings (10 cm shoot stage)20.77789.6620811.799611.0282
NODDeveloping tillers at six leaf stage, 3rd internode8.524287.9336510.120222.7332
CAR5Developing grain, bracts removed (5 DPA)8.6725610.15748.998596.195
CAR15Developing grain, bracts removed (15 DPA)3.114282.653762.822214.7533



CDS Structure of MLOC_38008






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_38008.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_38008.1NoneAvailableAvailablecontig_2549534 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g45510.2 -2 2e-14 71 31/48 (65%) 13106.m04798 protein thioredoxin, putative, expressed
TAIR PP10None-----