- Predicted Gene MLOC_38006
MLOC_38006 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.05907 | 0.904138 | 0.56805 | 1.1712 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0942522 | 0.103314 | 0.156217 | 0.134317 |
| INF1 | Young developing inflorescences (5mm) | 1.56745 | 2.87523 | 2.99747 | 3.07513 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.46043 | 1.40819 | 1.61456 | 2.28244 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.24641 | 2.00559 | 2.87936 | 3.99681 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.029354 | 0 | 0.302628 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.642278 | 0.902947 | 1.00371 | 1.33535 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.282103 | 0.299949 | 0.209671 | 0.883221 |
CDS Structure of MLOC_38006
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38006.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g18490.1 |
+2 |
3e-16 |
79 |
97/246 (39%) |
13103.m02215 protein RPGR, putative, expressed |
| TAIR PP10 | None | - | - | - | - | - |