- Predicted Gene MLOC_37989
MLOC_37989 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 42.1773 | 36.9216 | 34.5826 | 35.4313 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 59.8406 | 74.4189 | 105.167 | 58.2845 |
| INF1 | Young developing inflorescences (5mm) | 0.421841 | 0.542909 | 0.425086 | 0.398869 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.259349 | 0.0639747 | 0.29142 | 0.202091 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 68.8823 | 55.4292 | 46.4656 | 55.2636 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 13.7393 | 4.21265 | 8.18781 | 11.4478 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.84345 | 5.07111 | 5.71902 | 5.42223 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.8838 | 6.1536 | 3.65204 | 12.3517 |
CDS Structure of MLOC_37989
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_37989.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g08090.1 |
+2 |
0.0 |
823 |
420/471 (89%) |
13112.m00853 protein amino acid transporter, putative, expressed |
| TAIR PP10 |
AT1G77380.1 |
+2 |
0.0 |
640 |
319/466 (68%) |
| Symbols: AAP3, ATAAP3 | amino acid permease 3 | chr1:29075201-29077252 REVERSE LENGTH=476 |
