MLOC_3793 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.386971 | 0.53304 | 0.451052 | 0.48663 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.0357 | 22.1411 | 24.9778 | 15.8762 |
| INF1 | Young developing inflorescences (5mm) | 0.01973 | 0.0219264 | 0.0246031 | 0.0194942 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.139576 | 0.0376835 | 0.050452 | 0.0865427 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.10966 | 5.30369 | 4.13993 | 5.98618 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.270202 | 0.369252 | 0.601817 | 1.24869 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.0493536 | 0.0460938 | 0.024903 | 0.0399386 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.23804 | 3.22213 | 3.04358 | 7.68191 |
CDS Structure of MLOC_3793
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3793.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g24510.1 |
+3 |
0.0 |
590 |
291/479 (61%) |
13111.m02333 protein OsSCP56 - Putative Serine Carboxypeptidase homologue, expressed |
| TAIR PP10 |
AT5G09640.1 |
+3 |
6e-139 |
419 |
214/470 (46%) |
| Symbols: SNG2, SCPL19 | serine carboxypeptidase-like 19 | chr5:2988373-2990966 FORWARD LENGTH=465 |
