MLOC_3792 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.91763 | 3.88974 | 3.82068 | 4.10999 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.1828 | 2.44393 | 2.06611 | 1.82346 |
| INF1 | Young developing inflorescences (5mm) | 4.2552 | 4.32162 | 4.47359 | 3.72522 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.81378 | 3.65743 | 4.34315 | 4.22393 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.51143 | 3.20893 | 3.27347 | 3.72745 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.41172 | 2.28448 | 1.84956 | 6.54153 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.12124 | 4.65142 | 4.9515 | 4.42916 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.513078 | 0.870718 | 0.58873 | 1.58387 |
CDS Structure of MLOC_3792
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3792.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g33810.1 |
+2 |
5e-139 |
408 |
209/269 (78%) |
13108.m03528 protein lipoate protein ligase, putative, expressed |
| TAIR PP10 |
AT3G29010.1 |
+2 |
3e-88 |
276 |
142/250 (57%) |
Biotin/lipoate A/B protein ligase family | chr3:11006945-11007977 FORWARD LENGTH=262 |
