MLOC_37908 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1421720.2931790.3246490.237296
LEAShoots from the seedlings (10 cm shoot stage)0.55420.3593650.4814270.375586
INF1Young developing inflorescences (5mm)0.5808930.3602911.059330.514401
INF2Developing inflorescences (1-1.5 cm)2.983931.571351.920812.20797
ROORoots from the seedlings (10 cm shoot stage)0.03183620.1663650.09789640.151335
NODDeveloping tillers at six leaf stage, 3rd internode0.3415420.5086850.3522521.37503
CAR5Developing grain, bracts removed (5 DPA)0.6054990.5436040.4723020.482753
CAR15Developing grain, bracts removed (15 DPA)0.7920520.6854270.8625261.67841



CDS Structure of MLOC_37908






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37908.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37908.1NoneAvailableAvailablecontig_2549334 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g59230.1 +1 3e-41 102 51/128 (40%) 13101.m06293 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----