- Predicted Gene MLOC_37884
MLOC_37884 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 21.5381 | 16.6027 | 20.0192 | 17.2502 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 18.9246 | 21.866 | 27.1021 | 17.8884 |
| INF1 | Young developing inflorescences (5mm) | 11.1496 | 11.6273 | 9.71134 | 8.79937 |
| INF2 | Developing inflorescences (1-1.5 cm) | 13.8457 | 10.6536 | 15.491 | 13.3745 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 55.2709 | 38.8142 | 41.7732 | 43.4282 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 40.5215 | 49.0169 | 53.9056 | 137.907 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 14.9181 | 19.9268 | 18.541 | 16.089 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 9.22246 | 9.46204 | 7.82264 | 20.1659 |
CDS Structure of MLOC_37884
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_37884.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g55980.1 |
+2 |
2e-82 |
246 |
119/134 (89%) |
13102.m06427 protein vacuolar protein sorting 55 family protein, putative, expressed |
| TAIR PP10 |
AT1G32410.5 |
+2 |
6e-55 |
175 |
82/132 (62%) |
Vacuolar protein sorting 55 (VPS55) family protein | chr1:11694398-11695297 FORWARD LENGTH=140 |