MLOC_37862 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.603115.349115.566311.7903
LEAShoots from the seedlings (10 cm shoot stage)15.08076.333014.972326.86091
INF1Young developing inflorescences (5mm)10.835912.539713.04347.7816
INF2Developing inflorescences (1-1.5 cm)13.946212.46611.450211.256
ROORoots from the seedlings (10 cm shoot stage)7.085629.785548.395348.59233
NODDeveloping tillers at six leaf stage, 3rd internode8.726646.575976.3243917.9474
CAR5Developing grain, bracts removed (5 DPA)14.536212.683614.62510.3285
CAR15Developing grain, bracts removed (15 DPA)2.550542.113013.129494.33069



CDS Structure of MLOC_37862






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37862.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37862.1NoneAvailableAvailablecontig_2549253 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g35050.4 +3 5e-47 180 104/109 (95%) 13101.m03541 protein early-responsive to dehydration protein-related, putative, expressed
TAIR PP10 AT3G21620.1 +3 3e-44 172 102/160 (64%) ERD (early-responsive to dehydration stress) family protein | chr3:7611044-7614041 REVERSE LENGTH=756