MLOC_37790 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.20211.001510.875710.0903
LEAShoots from the seedlings (10 cm shoot stage)9.5312110.900115.24469.61994
INF1Young developing inflorescences (5mm)6.614816.016236.825924.73261
INF2Developing inflorescences (1-1.5 cm)5.75456.119576.063785.89734
ROORoots from the seedlings (10 cm shoot stage)6.50558.200427.066838.91049
NODDeveloping tillers at six leaf stage, 3rd internode8.260626.302179.089522.5925
CAR5Developing grain, bracts removed (5 DPA)5.395325.643056.657795.07817
CAR15Developing grain, bracts removed (15 DPA)4.058873.957523.167647.70305



CDS Structure of MLOC_37790






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37790.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37790.1CUST_12241_PI427708083AvailableAvailablecontig_2549113 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g12810.1 +2 6e-59 211 101/131 (77%) 13102.m01408 protein protein kinase domain containing protein, expressed
TAIR PP10 AT1G08720.1 +2 3e-52 192 87/111 (78%) | Symbols: EDR1, ATEDR1 | Protein kinase superfamily protein | chr1:2774089-2779077 FORWARD LENGTH=933