MLOC_37788 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.883484.37575.798236.10635
LEAShoots from the seedlings (10 cm shoot stage)2.139140.2869350.782671.62943
INF1Young developing inflorescences (5mm)12.393910.33357.366919.34227
INF2Developing inflorescences (1-1.5 cm)5.937178.9988111.21569.26044
ROORoots from the seedlings (10 cm shoot stage)6.902443.818384.013435.86683
NODDeveloping tillers at six leaf stage, 3rd internode0.9133841.207561.078615.40838
CAR5Developing grain, bracts removed (5 DPA)6.259475.723946.302766.13272
CAR15Developing grain, bracts removed (15 DPA)0.3603710.2361820.5266341.34219



CDS Structure of MLOC_37788






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37788.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37788.1CUST_5275_PI427708083AvailableAvailablecontig_2549106 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g38560.1 -1 1e-12 67 34/34 (100%) 13105.m04047 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative
TAIR PP10 AT3G09480.1 -1 1e-12 66 33/34 (97%) Histone superfamily protein | chr3:2914890-2915270 REVERSE LENGTH=126