MLOC_37787 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.531543.973463.580373.24093
LEAShoots from the seedlings (10 cm shoot stage)3.526282.283262.486332.31576
INF1Young developing inflorescences (5mm)4.216444.420345.335563.49148
INF2Developing inflorescences (1-1.5 cm)4.59934.799474.917194.72053
ROORoots from the seedlings (10 cm shoot stage)2.638665.184064.730815.30165
NODDeveloping tillers at six leaf stage, 3rd internode3.449014.49224.186914.3766
CAR5Developing grain, bracts removed (5 DPA)4.409743.618594.337233.56899
CAR15Developing grain, bracts removed (15 DPA)2.643282.548662.810635.29934



CDS Structure of MLOC_37787






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37787.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37787.2CUST_17656_PI427708080AvailableAvailablecontig_2549102 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g22090.1 -2 0.0 1626 850/1054 (81%) 13102.m02476 protein pattern formation protein EMB30, putative, expressed
TAIR PP10 AT1G13980.2 -2 0.0 1225 645/1060 (61%) | Symbols: GN | sec7 domain-containing protein | chr1:4789587-4794397 FORWARD LENGTH=1451