MLOC_37778 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.560612.963812.052512.8
LEAShoots from the seedlings (10 cm shoot stage)8.484993.734183.13414.59892
INF1Young developing inflorescences (5mm)29.680630.838231.636226.1117
INF2Developing inflorescences (1-1.5 cm)30.807637.917733.49438.8993
ROORoots from the seedlings (10 cm shoot stage)4.7170410.2027.6641311.5508
NODDeveloping tillers at six leaf stage, 3rd internode7.5335910.25237.5416632.0314
CAR5Developing grain, bracts removed (5 DPA)17.646116.820116.999817.2072
CAR15Developing grain, bracts removed (15 DPA)4.149933.782874.501539.46887



CDS Structure of MLOC_37778






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37778.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37778.1CUST_11565_PI427708080AvailableAvailablecontig_2549088 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g14080.1 -2 0.0 796 495/569 (87%) 13106.m01555 protein ATMAP70 protein, putative, expressed
TAIR PP10 AT1G24764.1 -2 0.0 676 422/565 (75%) | Symbols: ATMAP70-2, MAP70-2 | microtubule-associated proteins 70-2 | chr1:8760001-8763256 REVERSE LENGTH=634