- Predicted Gene MLOC_37777
MLOC_37777 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_37777_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_37777_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.30414 | 0.18943 | 0.0972995 | 0.212322 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.92124 | 1.56004 | 1.63143 | 1.19911 |
INF1 | Young developing inflorescences (5mm) | 0.0464414 | 0.0960174 | 0.0153873 | 0.0544985 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.106513 | 0.0222326 | 0.0737754 | 0.0817249 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.64078 | 2.5646 | 2.08881 | 3.29508 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0613373 | 0.0337456 | 0.105842 | 0.137855 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0142941 | 0.0275334 | 0.014394 | 0.0213916 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.011044 | 0 | 0 | 0.0130573 |
CDS Structure of MLOC_37777
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_37777.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g14050.1 |
+2 |
0.0 |
848 |
454/629 (72%) |
13106.m01551 protein membrane attack complex component/perforin/complement C9, putative, expressed |
TAIR PP10 |
AT1G14780.1 |
+2 |
1e-172 |
522 |
293/629 (47%) |
MAC/Perforin domain-containing protein | chr1:5091020-5093873 FORWARD LENGTH=627 |