MLOC_37777 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.304140.189430.09729950.212322
LEAShoots from the seedlings (10 cm shoot stage)0.921241.560041.631431.19911
INF1Young developing inflorescences (5mm)0.04644140.09601740.01538730.0544985
INF2Developing inflorescences (1-1.5 cm)0.1065130.02223260.07377540.0817249
ROORoots from the seedlings (10 cm shoot stage)2.640782.56462.088813.29508
NODDeveloping tillers at six leaf stage, 3rd internode0.06133730.03374560.1058420.137855
CAR5Developing grain, bracts removed (5 DPA)0.01429410.02753340.0143940.0213916
CAR15Developing grain, bracts removed (15 DPA)0.011044000.0130573



CDS Structure of MLOC_37777






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37777.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37777.1CUST_11564_PI427708080AvailableAvailablecontig_2549088 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g14050.1 +2 0.0 848 454/629 (72%) 13106.m01551 protein membrane attack complex component/perforin/complement C9, putative, expressed
TAIR PP10 AT1G14780.1 +2 1e-172 522 293/629 (47%) MAC/Perforin domain-containing protein | chr1:5091020-5093873 FORWARD LENGTH=627