MLOC_37774 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.926113.475313.067114.8809
LEAShoots from the seedlings (10 cm shoot stage)15.03934.16079.619058.66262
INF1Young developing inflorescences (5mm)24.685131.671335.772127.9737
INF2Developing inflorescences (1-1.5 cm)20.799623.8823.739526.9616
ROORoots from the seedlings (10 cm shoot stage)38.965234.036623.683344.7721
NODDeveloping tillers at six leaf stage, 3rd internode17.932226.308315.387583.548
CAR5Developing grain, bracts removed (5 DPA)23.234527.963324.424927.4677
CAR15Developing grain, bracts removed (15 DPA)5.446625.584265.3999313.6987



CDS Structure of MLOC_37774






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37774.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373469NoneNoneNoneNone
MLOC_37774.2CUST_2412_PI427708080AvailableAvailablecontig_2549082 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g05420.1 +2 0.0 699 366/439 (83%) 13112.m00546 protein calmodulin-binding protein, putative, expressed
TAIR PP10 AT3G52870.1 +2 7e-162 474 255/408 (63%) IQ calmodulin-binding motif family protein | chr3:19593365-19595686 REVERSE LENGTH=456