MLOC_37765 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.10413900.0265524
LEAShoots from the seedlings (10 cm shoot stage)1.90220.6274093.284130.266075
INF1Young developing inflorescences (5mm)0.720739000.0158856
INF2Developing inflorescences (1-1.5 cm)0.090489200.03655670.0391159
ROORoots from the seedlings (10 cm shoot stage)0.20057000.012876
NODDeveloping tillers at six leaf stage, 3rd internode0.3252660.06029640.1588220.143266
CAR5Developing grain, bracts removed (5 DPA)000.03245950.00712481
CAR15Developing grain, bracts removed (15 DPA)0.02526470.03897420.03508580.0572905



CDS Structure of MLOC_37765






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37765.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37765.1CUST_11561_PI427708080AvailableAvailablecontig_2549060 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g62910.1 -1 0.0 698 355/455 (78%) 13101.m06750 protein CRR2, putative, expressed
TAIR PP10 AT3G46790.1 -1 6e-177 532 262/413 (63%) | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:17231975-17233948 REVERSE LENGTH=657